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author | eliseo papa <elipapa@alum.mit.edu> | 2013-05-06 23:42:55 +0100 |
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committer | eliseo papa <elipapa@alum.mit.edu> | 2013-05-06 23:42:55 +0100 |
commit | f7404f0d3a7bc85ee160261c189916cc87cf2faa (patch) | |
tree | 2ae22151e190ca8cab4967dc08f4a2c0b13f5ff9 /index.md | |
parent | fa135e9767da174dd852571488144d2109265f31 (diff) |
begin to turn it into an anonymous repo
Diffstat (limited to 'index.md')
-rw-r--r-- | index.md | 265 |
1 files changed, 18 insertions, 247 deletions
@@ -2,108 +2,45 @@ layout: cv title: Eliseo Papa's CV --- -# Eliseo Papa -Biomedical Engineer, Computational Biologist, Data Scientist +# Isaac Newton +Physicist, mathematician, giant. <div id="webaddress"> -<script type="text/javascript"> -//<![CDATA[ -<!-- -var x="function f(x){var i,o=\"\",l=x.length;for(i=0;i<l;i+=2) {if(i+1<l)o+=" + -"x.charAt(i+1);try{o+=x.charAt(i);}catch(e){}}return o;}f(\"ufcnitnof x({)av" + -" r,i=o\\\"\\\"o,=l.xelgnhtl,o=;lhwli(e.xhcraoCedtAl(1/)3=!08{)rt{y+xx=l;=+;" + -"lc}tahce({)}}of(r=i-l;1>i0=i;--{)+ox=c.ahAr(t)i};erutnro s.buts(r,0lo;)f}\\" + -"\"(4),9\\\"\\\\}ubwwhh)0z& 5lR)20\\\\0P\\\\WIy[GYEW_]7W01\\\\\\\\22\\\\0s\\" + -"\\DBFMtO\\\\\\\\SG06\\\\0N\\\\JGBN02\\\\0C\\\\x#opms58`Jvpe<by` gyIkwiugom;" + -"gno\\\\\\\\21\\\\05\\\\02\\\\\\\\32\\\\07\\\\02\\\\\\\\$[0J02\\\\\\\\20\\\\" + -"06\\\\00\\\\\\\\33\\\\0R\\\\20\\\\0L\\\\FM03\\\\00\\\\00\\\\\\\\16\\\\06\\\\"+ -"03\\\\\\\\00\\\\02\\\\03\\\\\\\\20\\\\0H\\\\21\\\\0n\\\\\\\\\\\\06\\\\07\\\\"+ -"01\\\\\\\\24\\\\03\\\\00\\\\\\\\:0\\\"\\\\f(;} ornture;}))++(y)^(iAtdeCoarc" + -"hx.e(odrChamCro.fngriSt+=;o27=1y%2;*=)yy)4+(9i>f({i+)i+l;i<0;i=r(foh;gten.l" + -"=x,l\\\"\\\\\\\"\\\\o=i,r va){,y(x fontincfu)\\\"\")" ; -while(x=eval(x)); -//--> -//]]> </script> - -| <a href="http://eliseopapa.org">eliseopapa.org</a> -| <a href="http://uk.linkedin.com/in/eliseopapa">LinkedIn</a> +<a href="isaac@applesdofall.org">isaac@applesdofall.org</a> +| <a href="http://en.wikipedia.org/wiki/Isaac_Newton">My wikipedia page/a> </div> ## Currently -MBBS Candidate, Graduate Entry Medicine, Imperial College London -Researcher, [Alm lab](http://almlab.mit.edu), MIT +subject to my first law ### Specialized in -Medical Engineering, Analysis of large data sets, Microbiome, Machine learning, Immunology, Optics, Nano/microfabrication, Phylogenetics. +Laws of motion, gravitation, minting coins, disliking [Robert Hooke](http://en.wikipedia.org/wiki/Robert_Hooke) -### Research interests - -Host-pathogen interactions at the level of microbiome and single cells. Human Microbiome Project. High-throughput diagnostics. Electronic health records. Emerging properties of networks in a biological and social context. Self-organized systems. -## Languages +### Research interests -Italian: Mother tongue -English: Perfect oral & written fluency -French: Working knowledge +Cooling, power series, optics, alchemy, planetary motions, apples. ## Education -`2009-now` -__Imperial College London__ - -- MBBS Graduate Entry Medicine Programme - - -`2006-2012` -__Harvard Medical School & Massachusets Institute of Technology__ - -- PhD, Biomedical Engineering, - [Harvard/MIT Health Science & Technology Institute](http://hst.mit.edu) -- Thesis: [High-throughput experimental and computational tools for exploring immunity and the microbiome](https://speakerdeck.com/u/elipapa/p/phd-defense-talk-1) -- Representative courses: - - _Harvard Medical School_ - pathology, renal pathophysiology, respiratory pathophysiology, cardiac pathophysiology. - - _MIT_ - biomechanics, statistical learning, systems microbiology, forces fields and flows in biological systems, fluid mechanics, heat transfer, numerical modeling. - - -`2006-2008` -__Massachusets Institute of Technology__ - -- SM in Mechanical Engineering +`1654-1660` +__The King's School, Grantham.__ +`June 1661 - now` +__Trinity College, Cambridge__ -`2001-2005` -__University of Toronto__ +- Sizar -- BASc (Honors) -- Engineering Science, Biomedical Option +`1667 - +__Trinity College, Cambridge__ +- Fellow +Option -## Fellowships - -`2010-2011` -NSERC Postgraduate D Scholarship, National Science Engineering Research Council, Canada - -`2008-2009` -Poitras pre-doctoral fellowship - -`2007` -Martino Scholar, Harvard/MIT Health Science Tech. Inst. - -`2005-2008` -NSERC Postgraduate M Scholarship, National Science Engineering Research Council, Canada - -`2005` -OGS Postgraduate Scholarship (declined), Ontario Government, Canada - -`2004` -NSERC Summer Research Award, National Science Engineering Research Council, Canada - -`2003` -\#2 Canadian Army University Course Undergrad Scholarship,University of Toronto ## Awards @@ -139,71 +76,6 @@ Ontario Scholar, Government of Ontario, Canada [Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease.](http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0039242) **PLoS ONE** 2012;7(6):e39242. -`2011` -Rhiannon White, Sachiko Miyata, *Eliseo Papa*, Eric Spooner, Kleoniki Gounaris, Murray Selkirk, Katerina Artavanis-Tsakonas. -Characterisation of the Trichinella spiralis deubiquitinating enzyme, TsUCH37, an evolutionarily conserved proteasome interaction partner. -**PLoS Negl Trop Dis.** 2011 Oct;5(10):e1340. - -`2011` -Katerina Artavanis-Tsakonas, Pia V Kasperkovitz, *Eliseo Papa*, Michael L Cardenas, Nida S Khan, Annemarthe G Van der Veen, Hidde L Ploegh and Jatin M Vyas. -The Tetraspanin CD82 is Specifically Recruited to Fungal and Bacterial Phagosomes Prior to Acidification. -**Infection and Immunity** 2011 79(3):1098-106\ - -`2009` -Adebola Ogunniyi, Craig Story, *Eliseo Papa*, Eduardo Guillen, J. Christopher Love. -Screening Individual Hybridomas by Microengraving to Discover Monoclonal Antibodies. -**Nature Protocols** 2009 4(5):767-82 - -`2009` -Jehnna L. Ronan, Craig Story, *Eliseo Papa*, J. Christopher Love. -Optimization of the surfaces used to capture antibodies from single hybridomas reduces the time required for microengraving. -**Journal of Immunological Methods** 2009, 340(2):164-9\ - -`2008` -Craig Story\*, *Eliseo Papa\* (co-author)*, Chih-Chi Andrew Hu, Jehnna L Ronan, Hidde L Ploegh, J.Christopher Love. -Profiling Antibody Responses by Multiparametric Analysis of Single B Cells. -**PNAS** 2008 105(46):17902-7 - -`2005` -Hans Fischer, *Eli Papa*, Lichuan Liu, K. Sandy Pang, Warren C. W. Chan. -Preliminary Results: Exploring the Interactions of Quantum Dots with Whole Blood Components. -**SPIE Proceedings** 2005 5969,54 - -`2004` -Wen Jiang, *Eli Papa*, Hans Fischer, Sawitri Mardyani, Warren C.W. Chan. -Semiconductor quantum dots as contrast agents for whole animal imaging. -**Trends in Biotechnology** 2004 22:12 - - -### Posters - -`2012` -White RR, Morrow M, Miyata S, Papa E, Spooner E, Selkirk M, Gounaris K, Das C, Artavanis-Tsakonas K -Characterisation of the Trichinella Spiralis Deubiquitinating Enzyme, TsUCH37 -*Molecular and Cellular Biology of Helminth Parasites VII* - -`2012` -Eliseo Papa, Michael Docktor, Christopher Smillie, Sarah Weber, Sarah P. Preheim, Dirk Gevers, Georgia Giannoukos, Dawn Ciulla, Diana Tabbaa, Jay Ingram, David B Schauer, Doyle V Ward, Joshua R Korzenik, Ramnik J Xavier, Athos Bousvaros, Eric J Alm. -[Diagnosing IBD from the fecal microbiome](http://eliseopapa.org/downloads/documents/ibdML-poster.pdf) -*Exploring Human Host-Microbiome Interactions in Health and Disease, Wellcome Trust Scientific Conferences* - -`2008` -High-Throughput and High-Content Screening of Antibody Responses from Single Cells -*AIChE annual meeting, Nanoscale Science Engineering Forum* - -`2008` -Applying Ligands to B Cell Receptors by Microfluidics -*AIChE annual meeting, Engineering Fundamentals in Life Sciences* - -`2008` -Microengraving for high-throughput affinity mapping of humoral responses -*Harvard/MIT HST Forum* - -`2008` -Multi-variate profiling of B cell immune responses -*Novartis Vaccine Symposium* - - ### Patents `2009` @@ -220,59 +92,6 @@ __Alm Laboratory for Microbiology, Prof. Eric J. Alm__, MIT - Microbial evolution, phylogenetics -`2006-2009` -__Laboratory of Hidde L. Ploegh__, Whitehead Institute, MIT - -- Affinity and isotype mapping of antibody secretion in individual primary B cells. -- Development of computational and statistical tools to monitor and predict evolution of immune responses -- Murine antibody cloning and expression; fluorescence tagging -- Real time fluorescence microcopy; advanced image analysis - - -`2004-2005` -__Biomedical Nanotechnology Group, Prof. W C. Chan__, University of Toronto - -- Nanoparticles cytotoxicity -- Quantum Dots synthesis and characterization (TEM, Absorption, PL, X-IRD) -- Real time fluorescence microscopy, single molecule spectroscopy and biophysics. - - -`2003` -__Biomaterials Group, Prof. M.C.Tanzi__, Politecnico di Milano, Italy - -- Synthesis of biocompatible polymeric scaffolds for tissue engineering applications. -- Morphological, mechanical and functional characterization of polyurethane scaffolds. - - -## Other employment - -`2006` -__ESL Teacher, Inlingua Language School,__ Brescia, Italy - -- Teaching approx. 12hrs/week on individual basis and to large groups -- Provided on site focussed training for companies - - -`2004-2005` -__Residence Don, St.Michael’s College Residence,__ University of Toronto, Canada - -- Mediate conflicts and provide academic or personal consulting. -- Trained in cultural competence and conflict resolution -- Responsible to enforce rules and to foster an accepting community - - -`2000-2002` -__IT Consultant System Admin, Ital Engineering s.a.s.,__ Brescia, Italy - -- Interviewed the customer and performed an organizational analysis -- Regularly performed formal presentations to the management - - -`2000` -__Graphic Designer, Photo Image Studio,__ Brescia, Italy - -- Assisted photographers in the preparation of gallery exhibitions and openings - ## Extracurricular @@ -285,56 +104,8 @@ __Collegiate Cycling. [MIT Cycling Team](http://cycling.mit.edu/www/home)__ - Eastern Collegiate Cycling Conference Road Champions - Cyclocross, US National Champions - -`2006` -__Competitive Triathlon. Team Atletica Desenzano__ - -- 9th cat. at ITU Bardolino’s International Triathlon - - -`2003-2004` -__Competitive Sailing. Italian sailing federation (FIV).__ - -- 12th at European IMS Sailing Championship -- 6th at Canadian J105 Championship - - -`2004` -__Engineers Without Borders.__ - -- University of Toronto Conference delegate - - -`2002` -__University of Toronto Varsity Waterpolo.__ - -- OUA Conference Champions - - -`1998-2001` -__Nuoto Club Brescia Swimming Club__ - -- Regional level competitions - - - -## Volunteering - -`2005` -__Field Operative, AISPO, San Raffaele del Monte Tabor Foundation.__ Milan, Italy - -- Streamlined diagnostic routines, Kampala’s Hospital & Gulu’s outpost, Uganda -- Consulted regarding the infrastructure, human resources and logistics of the Kampala’s hospital - - -## Interests -Jazz music. International relations. Semiotics and -its implications on mass psychology. Buddhism, Zen and oriental -philosophies. Reading classics of Italian and English literature. -Travelled by kayak along the major European rivers. Rock Climbing. - <!-- ### Footer -Last updated: October 2012 --> +Last updated: May 2013 --> |