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diff --git a/cv_eliseo_papa.md b/cv_eliseo_papa.md index c04ec06..8cfcfb1 100644 --- a/cv_eliseo_papa.md +++ b/cv_eliseo_papa.md @@ -13,23 +13,22 @@ >Nationality: Italian & Canadian citizen ### Current position +: *MBBS Candidate* + Graduate Entry Medicine, Imperial College London -*Ph.D Candidate*, Health Science Technology Inst., Harvard/MIT\ -*MBBS Candidate*, Graduate Entry Medicine, Imperial College London +: Researcher + Alm lab @ MIT #### Areas of specialization -Medical Engineering, Analysis of large data sets, Microbiome, Machine -learning, Immunology, Optics, Nano/microfabrication, Phylogenetics. +Medical Engineering, Analysis of large data sets, Microbiome, Machine learning, Immunology, Optics, Nano/microfabrication, Phylogenetics. #### Research interests -Host-pathogen interactions at the level of microbiome and single cells. -Human Microbiome Project. Emerging properties of networks in a -biological and social context. Self-organized systems.\ +Host-pathogen interactions at the level of microbiome and single cells. Human Microbiome Project. Electronic health records. Emerging properties of networks in a biological and social context. Self-organized systems. ### Languages - Italian: Mother tongue -- English: Perfect oral written fluency; Canadian inflection\ -- French: Working knowledge\ +- English: Perfect oral written fluency; Canadian inflection +- French: Working knowledge ### Education Imperial College London @@ -40,13 +39,9 @@ Harvard Medical School & Massachusets Institute of Technology : PhD, [Harvard/MIT Health Science & Technology institute](hst.mit.edu) __2006 - 2012__ Biomedical Engineering - -* Harvard Medical School: pathology, renal pathophysiology, respiratory -pathophysiology, cardiac pathophysiology - -* MIT: biomechanics, forces fields and flows in biological systems, fluid -mechanics, numerical modeling, heat transfer, statistical learning, -systems microbiology\ + Thesis: [High-throughput experimental and computational tools for exploring immunity and the microbiome](https://speakerdeck.com/u/elipapa/p/phd-defense-talk-1) + * Harvard Medical School: pathology, renal pathophysiology, respiratory pathophysiology, cardiac pathophysiology + * MIT: biomechanics,statistical learning, systems microbiology forces fields and flows in biological systems, fluid mechanics, heat transfer, numerical modeling. Massachusets Institute of Technology : SM in Mechanical Engineering @@ -59,22 +54,30 @@ University of Toronto ### Fellowships -2010-2011NSERC Postgraduate D Scholarship, National Science Engineering -Research Council, Canada\ -Poitras Pre-doctoral Fellowship2008-2009\ -Martino Scholar, Harvard/MIT Health Science Tech. Inst.2007\ -NSERC Postgraduate M Scholarship,National Science Engineering Research -Council, Canada2005-2008\ -OGS Postgraduate Scholarship (declined), Ontario Government, Canada2005\ -NSERC Summer Research Award2004,National Science Engineering Research -Council, Canada\ -\#2 Canadian Army University Course Undergrad Scholarship,University of -Toronto2003\ +- NSERC Postgraduate D Scholarship, National Science Engineering Research Council, Canada +__2010-2011__ +- Poitras Pre-doctoral Fellowship +__2008-2009__ + +: Martino Scholar + Harvard/MIT Health Science Tech. Inst. + __2007__ + +: NSERC Postgraduate M Scholarship + National Science Engineering Research Council, Canada + __2005-2008__ + +: OGS Postgraduate Scholarship + (declined), Ontario Government, Canada2005 + +- __2004__ NSERC Summer Research Award, National Science Engineering Research Council, Canada +- __2003__ #2 Canadian Army University Course Undergrad Scholarship,University of +Toronto ###Honors awards +__2012__ Bursary recipient, *Exploring Human Host-Microbiome Interactions in Health and Disease*, Wellcome Trust Scientific Conferences +__2008__ Martha Gray Prizes for Excellence in Research, Annual Forum, Harvard/MIT Health Science Tech. Inst. -2008Martha Gray Prizes for Excellence in Research, Annual Forum, -Harvard/MIT Health Science Tech. Inst.\ Competition Semifinalist, MIT 100k Business Plan2008\ University of Toronto Life Sciences Award, University of Toronto2004\ Silver T – academic athletic excellence, University of Toronto2002-2004\ @@ -83,22 +86,20 @@ Ontario Scholar, 2001Government of Ontario, Canada\ ### Publications +[A list is also available online](http://scholar.google.co.uk/citations?user=LTOTl0YAAAAJ) #### Journal articles -2011**Eliseo Papa**, Michael Docktor, Christopher Smillie, Dirk Gevers, -Georgia Giannoukos, Dawn Ciulla, Diana Tabbaa, Jay Ingram, David B -Schauer, Doyle V Ward, Joshua R Korzenik, Ramnik J Xavier, Athos -Bousvaros, Eric J Alm. Non-invasive Mapping of the Gut Microbiota as a -Screening Method for Inflammatory Bowel Disease in Children and Young -Adults. *Gastroenterology - under review*\ -\ +**Eliseo Papa**, Michael Docktor, Christopher Smillie, Sarah Weber, Sarah Pacocha Preheim,Dirk Gevers,Georgia Giannoukos, Dawn Ciulla, Diana Tabbaa, Jay Ingram, David B +Schauer, Doyle V Ward, Joshua R Korzenik, Ramnik J Xavier, Athos Bousvaros, Eric J Alm. +Non-invasive mapping of the gastrointestinal microbiota +identifies children with inflammatory bowel disease. *PLoS One*. 2012;7(6):e39242. + 2011Rhiannon White, Sachiko Miyata, **Eliseo Papa**, Eric Spooner, Kleoniki Gounaris, Murray Selkirk, Katerina Artavanis-Tsakonas. Characterisation of the Trichinella spiralis deubiquitinating enzyme, -TsUCH37, an evolutionarily conserved proteasome interaction partner. -*PLOS Neglected tropical diseases - accepted*\ -\ +TsUCH37, an evolutionarily conserved proteasome interaction partner. *PLoS Negl Trop Dis.* 2011 Oct;5(10):e1340. + 2011Katerina Artavanis-Tsakonas, Pia V Kasperkovitz, **Eliseo Papa**, Michael L Cardenas, Nida S Khan, Annemarthe G Van der Veen, Hidde L Ploegh and Jatin M Vyas. The Tetraspanin CD82 is Specifically Recruited @@ -129,6 +130,14 @@ Chan. Semiconductor quantum dots as contrast agents for whole animal imaging. *Trends in Biotechnology [Impact Factor: 6.624]*, 22:12\ #### Posters +White RR, Morrow M, Miyata S, Papa E, Spooner E, Selkirk M, Gounaris K, Das C, Artavanis-Tsakonas K +Characterisation of the Trichinella Spiralis Deubiquitinating Enzyme, TsUCH37 +__2012__ Hydra 2012, Molecular and Cellular Biology of Helminth Parasites VII + +Eliseo Papa, Michael Docktor, Christopher Smillie, Sarah Weber, Sarah P. Preheim, Dirk Gevers, Georgia Giannoukos, Dawn Ciulla, Diana Tabbaa, Jay Ingram, David B Schauer, Doyle V Ward, Joshua R Korzenik, Ramnik J Xavier, Athos Bousvaros, Eric J Alm. +Diagnosing IBD from the fecal microbiome.(http://eliseopapa.org/downloads/documents/ibdML-poster.pdf) +__2012__ *Exploring Human Host-Microbiome Interactions in Health and Disease*, Wellcome Trust Scientific Conferences + 2008AIChE annual meeting, Nanoscale Science Engineering Forum, *High-Throughput and High-Content Screening of Antibody Responses from Single Cells*\ @@ -145,9 +154,9 @@ Microfluidic System, USA Serial No. 12/390279\ ### Research experience -2009 - presentResearcher, Alm Laboratory for Microbiology, Prof. Eric J. +Researcher, Alm Laboratory for Microbiology, Prof. Eric J. Alm, MIT - +__2009 - present__ Human Microbiome Project Bioinformatics, microbial evolution, phylogenetics\ @@ -261,4 +270,5 @@ its implications on mass psychology. Buddhism, Zen and oriental philosophies. Reading classics of Italian and English literature. Travelled by kayak along the major European rivers. Rock Climbing. -[elipapa@alum.mit.edu](mailto:elipapa@alum.mit.edu) — Last updated: +### Footer +Last updated: |