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diff --git a/cv_eliseo_papa.html b/cv_eliseo_papa.html deleted file mode 100644 index 7e86a1a..0000000 --- a/cv_eliseo_papa.html +++ /dev/null @@ -1,260 +0,0 @@ -<!doctype html> -<head> - <meta http-equiv="Content-Type" content="text/html; charset=utf-8"> - <link href="epcv.css" type="text/css" rel="stylesheet"> -</head> -<h1>Eliseo Papa</h1> -<p>Biomedical Engineer, Computational Biologist, Data Scientist</p> -<p><address markdown=1> -<a href="mailto:elipapa@alum.mit.edu">elipapa@alum.mit.edu</a> | -<a href="http://eliseopapa.org">eliseopapa.org</a> | -<a href="http://uk.linkedin.com/in/eliseopapa">LinkedIn</a> -<!-- > skype: eliseo.papa --> -<!-- +44 7503 858936 --> -<!-- > +1 347 635 4736 --> -</address></p> -<!-- ->Born: September 16, 1982 — Belleville, Canada ->Nationality: Italian & Canadian citizen ---> - -<h2>Current position</h2> -<p>MBBS Candidate, Graduate Entry Medicine, Imperial College London<br /> -Researcher, <a href="http://almlab.mit.edu">Alm lab</a>, MIT</p> -<h3>Specialized in</h3> -<p>Medical Engineering, Analysis of large data sets, Microbiome, Machine learning, Immunology, Optics, Nano/microfabrication, Phylogenetics.</p> -<h3>Research interests</h3> -<p>Host-pathogen interactions at the level of microbiome and single cells. Human Microbiome Project. High-throughput diagnostics. Electronic health records. Emerging properties of networks in a biological and social context. Self-organized systems.</p> -<h2>Languages</h2> -<p>Italian: Mother tongue<br /> -English: Perfect oral & written fluency<br /> -French: Working knowledge<br /> -</p> -<h2>Education</h2> -<p><code>2009-now</code> -<strong>Imperial College London</strong></p> -<ul> -<li>MBBS Graduate Entry Medicine Programme</li> -</ul> -<p><code>2006-2012</code> -<strong>Harvard Medical School & Massachusets Institute of Technology</strong></p> -<ul> -<li>PhD, Biomedical Engineering, - <a href="http://hst.mit.edu">Harvard/MIT Health Science & Technology Institute</a><br /> -</li> -<li>Thesis: <a href="https://speakerdeck.com/u/elipapa/p/phd-defense-talk-1">High-throughput experimental and computational tools for exploring immunity and the microbiome</a><br /> -</li> -<li>Representative courses:<br /> -<ul> -<li><em>Harvard Medical School</em> - pathology, renal pathophysiology, respiratory pathophysiology, cardiac pathophysiology.<br /> -</li> -<li><em>MIT</em> - biomechanics, statistical learning, systems microbiology, forces fields and flows in biological systems, fluid mechanics, heat transfer, numerical modeling.</li> -</ul> -</li> -</ul> -<p><code>2006-2008</code> -<strong>Massachusets Institute of Technology</strong></p> -<ul> -<li>SM in Mechanical Engineering</li> -</ul> -<p><code>2001-2005</code> -<strong>University of Toronto</strong></p> -<ul> -<li>BASc (Honors)</li> -<li>Engineering Science, Biomedical Option</li> -</ul> -<h2>Fellowships</h2> -<p><code>2010-2011</code> -NSERC Postgraduate D Scholarship, National Science Engineering Research Council, Canada</p> -<p><code>2008-2009</code> -Poitras pre-doctoral fellowship </p> -<p><code>2007</code> -Martino Scholar, Harvard/MIT Health Science Tech. Inst.</p> -<p><code>2005-2008</code> -NSERC Postgraduate M Scholarship, National Science Engineering Research Council, Canada</p> -<p><code>2005</code> -OGS Postgraduate Scholarship (declined), Ontario Government, Canada</p> -<p><code>2004</code> -NSERC Summer Research Award, National Science Engineering Research Council, Canada</p> -<p><code>2003</code> -#2 Canadian Army University Course Undergrad Scholarship,University of Toronto</p> -<h2>Awards</h2> -<p><code>2012</code> -Bursary recipient, <em>Exploring Human Host-Microbiome Interactions in Health and Disease</em>, Wellcome Trust Scientific Conferences</p> -<p><code>2008</code> -Martha Gray Prizes for Excellence in Research, Annual Forum, Harvard/MIT Health Science Tech. Inst.</p> -<p><code>2008</code> -Competition Semifinalist, MIT 100k Business Plan</p> -<p><code>2004</code> -University of Toronto Life Sciences Award, University of Toronto</p> -<p><code>2002-04</code> -Silver T – academic athletic excellence, University of Toronto</p> -<p><code>2003</code> -OUA Academic Achievement Award, Ontario, Canada</p> -<p><code>2001</code> -Ontario Scholar, Government of Ontario, Canada</p> -<h2>Publications</h2> -<!-- A list is also available [online](http://scholar.google.co.uk/citations?user=LTOTl0YAAAAJ) --> - -<h3>Journals</h3> -<p><code>2012</code> -<em>Eliseo Papa</em>, Michael Docktor, Christopher Smillie, Sarah Weber, Sarah Pacocha Preheim,Dirk Gevers,Georgia Giannoukos, Dawn Ciulla, Diana Tabbaa, Jay Ingram, David B Schauer, Doyle V Ward, Joshua R Korzenik, Ramnik J Xavier, Athos Bousvaros, Eric J Alm.<br /> -<a href="http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0039242">Non-invasive mapping of the gastrointestinal microbiota identifies children with inflammatory bowel disease.</a> -<strong>PLoS ONE</strong> 2012;7(6):e39242.</p> -<p><code>2011</code> -Rhiannon White, Sachiko Miyata, <em>Eliseo Papa</em>, Eric Spooner, Kleoniki Gounaris, Murray Selkirk, Katerina Artavanis-Tsakonas.<br /> -Characterisation of the Trichinella spiralis deubiquitinating enzyme, TsUCH37, an evolutionarily conserved proteasome interaction partner. -<strong>PLoS Negl Trop Dis.</strong> 2011 Oct;5(10):e1340.</p> -<p><code>2011</code> -Katerina Artavanis-Tsakonas, Pia V Kasperkovitz, <em>Eliseo Papa</em>, Michael L Cardenas, Nida S Khan, Annemarthe G Van der Veen, Hidde L Ploegh and Jatin M Vyas.<br /> -The Tetraspanin CD82 is Specifically Recruited to Fungal and Bacterial Phagosomes Prior to Acidification. -<strong>Infection and Immunity</strong> 2011 79(3):1098-106\</p> -<p><code>2009</code> -Adebola Ogunniyi, Craig Story, <em>Eliseo Papa</em>, Eduardo Guillen, J. Christopher Love.<br /> -Screening Individual Hybridomas by Microengraving to Discover Monoclonal Antibodies. -<strong>Nature Protocols</strong> 2009 4(5):767-82</p> -<p><code>2009</code> -Jehnna L. Ronan, Craig Story, <em>Eliseo Papa</em>, J. Christopher Love. -Optimization of the surfaces used to capture antibodies from single hybridomas reduces the time required for microengraving. -<strong>Journal of Immunological Methods</strong> 2009, 340(2):164-9\</p> -<p><code>2008</code> -Craig Story*, <em>Eliseo Papa* (co-author)</em>, Chih-Chi Andrew Hu, Jehnna L Ronan, Hidde L Ploegh, J.Christopher Love.<br /> -Profiling Antibody Responses by Multiparametric Analysis of Single B Cells. -<strong>PNAS</strong> 2008 105(46):17902-7</p> -<p><code>2005</code> -Hans Fischer, <em>Eli Papa</em>, Lichuan Liu, K. Sandy Pang, Warren C. W. Chan.<br /> -Preliminary Results: Exploring the Interactions of Quantum Dots with Whole Blood Components. -<strong>SPIE Proceedings</strong> 2005 5969,54</p> -<p><code>2004</code> -Wen Jiang, <em>Eli Papa</em>, Hans Fischer, Sawitri Mardyani, Warren C.W. Chan. -Semiconductor quantum dots as contrast agents for whole animal imaging. -<strong>Trends in Biotechnology</strong> 2004 22:12</p> -<h3>Posters</h3> -<p><code>2012</code> -White RR, Morrow M, Miyata S, Papa E, Spooner E, Selkirk M, Gounaris K, Das C, Artavanis-Tsakonas K<br /> -Characterisation of the Trichinella Spiralis Deubiquitinating Enzyme, TsUCH37<br /> -<em>Molecular and Cellular Biology of Helminth Parasites VII</em></p> -<p><code>2012</code> -Eliseo Papa, Michael Docktor, Christopher Smillie, Sarah Weber, Sarah P. Preheim, Dirk Gevers, Georgia Giannoukos, Dawn Ciulla, Diana Tabbaa, Jay Ingram, David B Schauer, Doyle V Ward, Joshua R Korzenik, Ramnik J Xavier, Athos Bousvaros, Eric J Alm.<br /> -<a href="http://eliseopapa.org/downloads/documents/ibdML-poster.pdf">Diagnosing IBD from the fecal microbiome</a><br /> -<em>Exploring Human Host-Microbiome Interactions in Health and Disease, Wellcome Trust Scientific Conferences</em></p> -<p><code>2008</code> -High-Throughput and High-Content Screening of Antibody Responses from Single Cells<br /> -<em>AIChE annual meeting, Nanoscale Science Engineering Forum</em></p> -<p><code>2008</code> -Applying Ligands to B Cell Receptors by Microfluidics<br /> -<em>AIChE annual meeting, Engineering Fundamentals in Life Sciences</em></p> -<p><code>2008</code> -Microengraving for high-throughput affinity mapping of humoral responses<br /> -<em>Harvard/MIT HST Forum</em></p> -<p><code>2008</code> -Multi-variate profiling of B cell immune responses<br /> -<em>Novartis Vaccine Symposium</em></p> -<h3>Patents</h3> -<p><code>2009</code> -Composition of an Array of Microwells with an Integrated Microfluidic System, USA Serial No. 12/390279 </p> -<h2>Research</h2> -<p><code>2009-now</code> -<strong>Alm Laboratory for Microbiology, Prof. Eric J. Alm</strong>, MIT</p> -<ul> -<li>Human Microbiome Project </li> -<li>Bioinformatic analysis of large datasets</li> -<li>Microbial evolution, phylogenetics</li> -</ul> -<p><code>2006-2009</code> -<strong>Laboratory of Hidde L. Ploegh</strong>, Whitehead Institute, MIT</p> -<ul> -<li>Affinity and isotype mapping of antibody secretion in individual primary B cells.</li> -<li>Development of computational and statistical tools to monitor and predict evolution of immune responses</li> -<li>Murine antibody cloning and expression; fluorescence tagging</li> -<li>Real time fluorescence microcopy; advanced image analysis</li> -</ul> -<p><code>2004-2005</code> -<strong>Biomedical Nanotechnology Group, Prof. W C. Chan</strong>, University of Toronto</p> -<ul> -<li>Nanoparticles cytotoxicity</li> -<li>Quantum Dots synthesis and characterization (TEM, Absorption, PL, X-IRD)</li> -<li>Real time fluorescence microscopy, single molecule spectroscopy and biophysics.</li> -</ul> -<p><code>2003</code> -<strong>Biomaterials Group, Prof. M.C.Tanzi</strong>, Politecnico di Milano, Italy</p> -<ul> -<li>Synthesis of biocompatible polymeric scaffolds for tissue engineering applications.</li> -<li>Morphological, mechanical and functional characterization of polyurethane scaffolds.</li> -</ul> -<h2>Other employment</h2> -<p><code>2006</code> -<strong>ESL Teacher, Inlingua Language School,</strong> Brescia, Italy</p> -<ul> -<li>Teaching approx. 12hrs/week on individual basis and to large groups</li> -<li>Provided on site focussed training for companies</li> -</ul> -<p><code>2004-2005</code> -<strong>Residence Don, St.Michael’s College Residence,</strong> University of Toronto, Canada</p> -<ul> -<li>Mediate conflicts and provide academic or personal consulting.</li> -<li>Trained in cultural competence and conflict resolution</li> -<li>Responsible to enforce rules and to foster an accepting community</li> -</ul> -<p><code>2000-2002</code> -<strong>IT Consultant System Admin, Ital Engineering s.a.s.,</strong> Brescia, Italy</p> -<ul> -<li>Interviewed the customer and performed an organizational analysis</li> -<li>Regularly performed formal presentations to the management</li> -</ul> -<p><code>2000</code> -<strong>Graphic Designer, Photo Image Studio,</strong> Brescia, Italy</p> -<ul> -<li>Assisted photographers in the preparation of gallery exhibitions and openings</li> -</ul> -<h2>Extracurricular</h2> -<p><code>2006-2008</code> -<strong>Collegiate Cycling. <a href="http://cycling.mit.edu/www/home">MIT Cycling Team</a></strong></p> -<ul> -<li>National Collegiate Road Champions</li> -<li>Eastern Collegiate Cycling Conference Road Champions</li> -<li><em>Captain</em>, Cyclocross, 2nd US National Championship</li> -<li>Eastern Collegiate Cycling Conference Road Champions</li> -<li>Cyclocross, US National Champions</li> -</ul> -<p><code>2006</code> -<strong>Competitive Triathlon. Team Atletica Desenzano</strong></p> -<ul> -<li>9th cat. at ITU Bardolino’s International Triathlon</li> -</ul> -<p><code>2003-2004</code> -<strong>Competitive Sailing. Italian sailing federation (FIV).</strong></p> -<ul> -<li>12th at European IMS Sailing Championship</li> -<li>6th at Canadian J105 Championship</li> -</ul> -<p><code>2004</code> -<strong>Engineers Without Borders.</strong></p> -<ul> -<li>University of Toronto Conference delegate</li> -</ul> -<p><code>2002</code> -<strong>University of Toronto Varsity Waterpolo.</strong></p> -<ul> -<li>OUA Conference Champions</li> -</ul> -<p><code>1998-2001</code> -<strong>Nuoto Club Brescia Swimming Club</strong></p> -<ul> -<li>Regional level competitions</li> -</ul> -<h2>Volunteering</h2> -<p><code>2005</code> -<strong>Field Operative, AISPO, San Raffaele del Monte Tabor Foundation.</strong> Milan, Italy</p> -<ul> -<li>Streamlined diagnostic routines, Kampala’s Hospital & Gulu’s outpost, Uganda</li> -<li>Consulted regarding the infrastructure, human resources and logistics of the Kampala’s hospital</li> -</ul> -<h2>Interests</h2> -<p>Jazz music. International relations. Semiotics and -its implications on mass psychology. Buddhism, Zen and oriental -philosophies. Reading classics of Italian and English literature. -Travelled by kayak along the major European rivers. Rock Climbing.</p> -<!-- ### Footer - -Last updated: October 2012 -->
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